Solyc02g087400.1.1 (Solyc02g087400.1)


Aliases : Solyc02g087400.1

Description : 28.1 DNA.synthesis/chromatin structure A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1. CHAOS (CAO)


Gene families : OG_01_0008427 (Gene family) Phylogenetic Tree(s): OG0008427_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g087400.1.1
Cluster HCCA cluster: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT2G47450 CPSRP43, CAO chloroplast signal recognition particle component (CAO) 0.08 Gene family
Cre04.g231026 No alias 28.1 DNA.synthesis/chromatin structure A component of... 0.01 Gene family
LOC_Os03g03990 Os03g0131900 28.1 DNA.synthesis/chromatin structure A component of... 0.06 Gene family
MA_845170g0010 No alias 28.1 DNA.synthesis/chromatin structure A component of... 0.02 Gene family
Smo270723 PACid_15422478 No description available 0.03 Gene family
Zm00001d027518 GRMZM2G007441 28.1 DNA.synthesis/chromatin structure A component of... 0.07 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR023780 Chromo_domain 316 361
No external refs found!