Solyc02g086730.2.1 (Solyc02g086730.2)


Aliases : Solyc02g086730.2

Description : 29.2.1.1.1.2.12 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.50S subunit.L12 50S ribosomal protein L12-A ribosomal protein L12-A (RPL12-A)


Gene families : OG_01_0006146 (Gene family) Phylogenetic Tree(s): OG0006146_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g086730.2.1
Cluster HCCA cluster: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT3G27830 RPL12-A, RPL12 ribosomal protein L12-A 0.08 Gene family
AT3G27850 RPL12-C ribosomal protein L12-C 0.11 Gene family
Cre13.g581650 No alias 29.2.1.1.1.2.12 protein.synthesis.ribosomal... 0.1 Gene family
GSVIVT01032454001 No alias 29.2.1.1.1.2.12 protein.synthesis.ribosomal... 0.11 Gene family
LOC_Os01g47330 Os01g0662300 29.2.1.1.1.2.12 protein.synthesis.ribosomal... 0.06 Gene family
LOC_Os05g49320 Os05g0568300 29.2.1.1.1.2.12 protein.synthesis.ribosomal... 0.07 Gene family
Zm00001d043972 GRMZM2G360021 29.2.1.1.1.2.12 protein.synthesis.ribosomal... 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008932 Ribosomal_L7/L12_oligo 64 111
IPR013823 Ribosomal_L7/L12_C 123 184
IPR013823 Ribosomal_L7/L12_C 225 289
No external refs found!