Aspi01Gene72848.t1 (ABCG40, PDR12,...)

Aliases : ABCG40, PDR12, ATABCG40, ATPDR12, Aspi01Gene72848

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene72848.t1
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00225530	PIS1, ABCG37,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AT4G15230	ATPDR2, PDR2	pleiotropic drug resistance 2	0.02	OrthoFinder output from all 47 species
Als_g61298	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene02114.t2	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene28063.t1	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene69802.t1	ATPDR3, PDR3,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene69808.t2	ATPDR3, PDR3,...	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene72853.t1	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0098.g043944	PEN3, ABCG36,...	subfamily ABCG transporter & original description: CDS=1-4371	0.03	OrthoFinder output from all 47 species
Azfi_s0098.g043953	PEN3, ABCG36,...	subfamily ABCG transporter & original description: CDS=1-3627	0.03	OrthoFinder output from all 47 species
Cba_g27199	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g76765	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01033804001	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
LOC_Os09g16449.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Lfl_g09079	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
MA_12965g0010	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_165288g0010	PDR1, ATPDR1	ABC transporter G family member 36 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
MA_300423g0010	PEN3, ABCG36,...	ABC transporter G family member 36 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp4g06670.1	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Mp8g13070.1	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Ppi_g09231	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g59241	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g62332	ABCG40, PDR12,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g63364	ABCG40, PDR12,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020342	PEN3, ABCG36,...	subfamily ABCG transporter & original description: CDS=1195-5658	0.03	OrthoFinder output from all 47 species
Solyc05g018510.3.1	PDR4, ATPDR4,...	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Solyc11g007290.1.1	PDR11, ATPDR11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e016714_P002	PDR4, ATPDR4,...	cuticular lipid exporter (PEC1). subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR043926	ABCG_dom	389	469
IPR043926	ABCG_dom	1081	1142
IPR003439	ABC_transporter-like_ATP-bd	175	356
IPR013525	ABC_2_trans	510	722
IPR013525	ABC_2_trans	1198	1410
IPR029481	ABC_trans_N	98	149
IPR013581	PDR_assoc	727	792
IPR003439	ABC_transporter-like_ATP-bd	900	1052

External Links

No external refs found!

Aspi01Gene72848.t1 (ABCG40, PDR12,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation