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  5. Aspi01Gene72838.t1

Aspi01Gene72838.t1 (PDR6, ATPDR6, Aspi01Gene72838)


Aliases : PDR6, ATPDR6, Aspi01Gene72838

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene72838.t1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00185210 PDR6, ATPDR6,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT2G26910 PDR4, ATPDR4 pleiotropic drug resistance 4 0.03 OrthoFinder output from all 47 species
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.02 OrthoFinder output from all 47 species
Aspi01Gene64035.t2 PDR6, ATPDR6,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37574 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Gb_41755 PEN3, ABCG36,... subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
LOC_Os01g42350.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g32690.1 PIS1, ABCG37,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os06g36090.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp1g24380.1 PEN3, ABCG36,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp1g25350.1 ATPDR7, PDR7 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Smo133564 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo441717 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo441720 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Solyc12g098210.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
Spa_g09122 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30595 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026148_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e027850_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 235 385
IPR013525 ABC_2_trans 2 68
IPR013525 ABC_2_trans 531 743
IPR013581 PDR_assoc 82 138
No external refs found!