Aspi01Gene72300.t1 (Aspi01Gene72300)

Aliases : Aspi01Gene72300

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene72300.t1
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
Ala_g25188	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g04970	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g24120	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g21986	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene05718.t1	Aspi01Gene05718	pectin methylesterase & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene10492.t1	Aspi01Gene10492	pectin methylesterase & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene30603.t1	Aspi01Gene30603	EC_3.1 hydrolase acting on ester bond & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene31942.t1	Aspi01Gene31942	pectin methylesterase & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0040.g026612	No alias	pectin methylesterase & original description: CDS=139-1269	0.04	OrthoFinder output from all 47 species
Azfi_s0215.g058398	No alias	pectin methylesterase & original description: CDS=361-1539	0.03	OrthoFinder output from all 47 species
Azfi_s0516.g074982	No alias	not classified & original description: CDS=1-498	0.05	OrthoFinder output from all 47 species
Azfi_s0648.g080905	No alias	pectin methylesterase & original description: CDS=1-489	0.05	OrthoFinder output from all 47 species
Cba_g34624	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.10G076400.1	Ceric.10G076400	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.29G054600.1	Ceric.29G054600	pectin methylesterase & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g11820	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Dac_g15161	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g17627	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01018823001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.01	OrthoFinder output from all 47 species
Mp1g17560.1	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Mp2g01420.1	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Mp3g01170.1	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Mp5g03920.1	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Mp5g03930.1	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Nbi_g02928	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g03059	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Nbi_g08076	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g14686	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g26065	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g26499	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g24799	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g10100	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	97	386

External Links

No external refs found!

Aspi01Gene72300.t1 (Aspi01Gene72300)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation