Aspi01Gene72268.t1 (Aspi01Gene72268)


Aliases : Aspi01Gene72268

Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene72268.t1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Als_g06416 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03586 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55577.t1 Aspi01Gene55577 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene69874.t1 CAMTA3, SR1,... CAMTA-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g07424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g30774.1 LOC_Os07g30774 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Len_g11230 No alias CAMTA-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_16615g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g13205 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17074 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo441667 CAMTA3, SR1 RNA biosynthesis.transcriptional activation.CAMTA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 356 374
IPR000048 IQ_motif_EF-hand-BS 379 398
No external refs found!