Aspi01Gene72266.t1 (CAMTA3, SR1, Aspi01Gene72266)

Aliases : CAMTA3, SR1, Aspi01Gene72266

Description : not classified & original description: none

Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene72266.t1
Cluster	HCCA: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
AT4G16150	No alias	calmodulin binding;transcription regulators	0.03	OrthoFinder output from all 47 species
Aob_g03586	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene55577.t1	Aspi01Gene55577	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene69874.t1	CAMTA3, SR1,...	CAMTA-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Cba_g07424	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os07g30774.1	LOC_Os07g30774	transcription factor (CAMTA)	0.02	OrthoFinder output from all 47 species
Len_g16770	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g15357	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g17074	No alias	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g29383	No alias	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo441667	CAMTA3, SR1	RNA biosynthesis.transcriptional activation.CAMTA...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005559	CG-1_dom	50	163

External Links

No external refs found!