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  5. Aspi01Gene72040.t1

Aspi01Gene72040.t1 (AT-TCP20, TCP20,...)


Aliases : AT-TCP20, TCP20, PCF1, ATTCP20, Aspi01Gene72040

Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene72040.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00257890 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00040760 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.morning element... 0.02 OrthoFinder output from all 47 species
AT1G35560 No alias TCP family transcription factor 0.02 OrthoFinder output from all 47 species
AT3G27010 AT-TCP20, TCP20,... TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family... 0.03 OrthoFinder output from all 47 species
Adi_g007407 AT-TCP20, TCP20,... circAdian clock activation factor *(TCP20) & original... 0.03 OrthoFinder output from all 47 species
Adi_g055980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059260 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g060147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069116 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g074351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086308 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087907 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06733 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11848 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010337 AtTCP14, TCP14 TCP-type transcription factor & original description: CDS=1-2394 0.04 OrthoFinder output from all 47 species
Cba_g15454 No alias TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.12G053600.1 AtTCP14, TCP14,... TCP-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.25G015000.1 Ceric.25G015000 TCP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g01691 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26686 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008023001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01023283001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01026145001 No alias Multi-process regulation.circadian clock.morning element... 0.03 OrthoFinder output from all 47 species
LOC_Os01g14380.1 LOC_Os01g14380 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os02g51280.1 LOC_Os02g51280 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Lfl_g07877 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10117 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35770 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07074 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50317 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g103780.4.1 Solyc01g103780 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc03g006800.1.1 Solyc03g006800 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Spa_g17288 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003744_P001 Zm00001e003744 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e023066_P001 Zm00001e023066 transcription factor (TCP). CHE circadian clock repression factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 138 204
No external refs found!