1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene71929.t1

Aspi01Gene71929.t1 (DND1, ATCNGC2, CNGC2,...)


Aliases : DND1, ATCNGC2, CNGC2, Aspi01Gene71929

Description : temperature sensor protein *(CNGC2) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene71929.t1

Target Alias Description ECC score Gene Family Method Actions
AT2G24610 ATCNGC14, CNGC14 cyclic nucleotide-gated channel 14 0.02 OrthoFinder output from all 47 species
AT2G28260 CNGC15, ATCNGC15 cyclic nucleotide-gated channel 15 0.02 OrthoFinder output from all 47 species
AT2G46440 CNGC11, ATCNGC11 cyclic nucleotide-gated channels 0.03 OrthoFinder output from all 47 species
AT2G46450 ATCNGC12, CNGC12 cyclic nucleotide-gated channel 12 0.04 OrthoFinder output from all 47 species
AT3G17690 CNGC19, ATCNGC19 cyclic nucleotide gated channel 19 0.04 OrthoFinder output from all 47 species
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.04 OrthoFinder output from all 47 species
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.03 OrthoFinder output from all 47 species
AT5G15410 DND1, ATCNGC2, CNGC2 Cyclic nucleotide-regulated ion channel family protein 0.03 OrthoFinder output from all 47 species
Ala_g13851 ATCNGC14, CNGC14 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Lfl_g37444 DND1, ATCNGC2, CNGC2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_167620g0010 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel (CNGC).... 0.03 OrthoFinder output from all 47 species
Solyc08g069140.4.1 ATCNGC14,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Solyc11g069580.2.1 CNGC15,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Spa_g19379 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Zm00001e012009_P001 DND1, ATCNGC2,... cyclic nucleotide-gated cation channel (CNGC).... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 159 474
IPR000595 cNMP-bd_dom 570 655
No external refs found!