Aspi01Gene71894.t1 (PUB8, B80, Aspi01Gene71894)

Aliases : PUB8, B80, Aspi01Gene71894

Description : E3 ubiquitin ligase *(PUB8) & original description: none

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene71894.t1

Target	Alias	Description	ECC score	Gene Family Method
Als_g14928	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.1Z013500.1	PUB13, ATPUB13,...	E3 ubiquitin ligase & original description:...	0.07	OrthoFinder output from all 47 species
Ceric.26G012900.1	Ceric.26G012900	not classified & original description: pacid=50598948...	0.03	OrthoFinder output from all 47 species
Ehy_g22153	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os01g72600.1	LOC_Os01g72600	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Len_g41496	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
MA_161374g0020	PUB18, ATPUB18	U-box domain-containing protein 1 OS=Medicago truncatula...	0.03	OrthoFinder output from all 47 species
Solyc05g005670.1.1	Solyc05g005670	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006911	ARM-rpt_dom	141	274
IPR000225	Armadillo	303	342
IPR003613	Ubox_domain	5	74

External Links

No external refs found!