Aspi01Gene71357.t1 (PUB25, Aspi01Gene71357)


Aliases : PUB25, Aspi01Gene71357

Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene71357.t1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
MA_10432981g0010 PUB22 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g34239 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g04485 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 8 75
No external refs found!