Solyc02g085190.2.1 (Solyc02g085190.2)


Aliases : Solyc02g085190.2

Description : 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo. MONOPOLE (MNP)


Gene families : OG_01_0000059 (Gene family) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g085190.2.1
Cluster HCCA cluster: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT3G06740 GATA15 GATA transcription factor 15 0.04 Gene family
GSVIVT01018951001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
LOC_Os01g47360 Os01g0662800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.06 Gene family
LOC_Os01g74540 Os01g0976800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os05g44400 Os05g0520300 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
LOC_Os05g49280 Os05g0567900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os05g50270 Os05g0578900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
MA_10434815g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
MA_10436047g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
MA_18616g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
MA_92522g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Solyc01g100220.3.1 Solyc01g100220.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
Zm00001d002811 GRMZM2G404973 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d009604 GRMZM5G887975 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
Zm00001d009668 GRMZM2G397616 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.08 Gene family
Zm00001d010785 GRMZM2G135381 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d011771 GRMZM2G138967 No description available 0.04 Gene family
Zm00001d017409 GRMZM2G140669 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
Zm00001d039113 GRMZM2G325850 No description available 0.05 Gene family
Zm00001d043969 GRMZM2G123909 No description available 0.04 Gene family
Zm00001d048391 GRMZM2G532534 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 131 165
No external refs found!