Solyc02g084520.3.1 (Solyc02g084520.3)


Aliases : Solyc02g084520.3

Description : 27.3.63 RNA.regulation of transcription.PHD finger transcription factor DNA bindingzinc ion bindingnucleic acid bindingnucleic acid binding


Gene families : OG_01_0002662 (Gene family) Phylogenetic Tree(s): OG0002662_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g084520.3.1
Cluster HCCA cluster: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AT2G16485 No alias nucleic acid binding;zinc ion binding;DNA binding 0.02 Gene family
AT3G51120 No alias DNA binding;zinc ion binding;nucleic acid... 0.06 Gene family
LOC_Os09g36090 Os09g0530500,... 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.04 Gene family
LOC_Os10g36810 Os10g0511800,... 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.04 Gene family
MA_116694g0010 No alias 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.02 Gene family
Zm00001d012755 GRMZM2G350447 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.1 Gene family
Zm00001d027334 GRMZM2G436226 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.09 Gene family
Zm00001d032471 No alias 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.07 Gene family
Zm00001d043434 GRMZM2G443814 35.2 not assigned.unknown nucleic acid bindingzinc ion... 0.09 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004343 Plus-3_dom 502 595
IPR003121 SWIB_MDM2_domain 366 439
IPR003169 GYF 795 833
No external refs found!