Aspi01Gene69210.t1 (Aspi01Gene69210)

Aliases : Aspi01Gene69210

Description : DNA primase and helicase *(TWINKLE) & original description: none

Gene families : OG0002154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002154_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene69210.t1

Target	Alias	Description	ECC score	Gene Family Method
Ala_g24741	No alias	DNA primase and helicase *(TWINKLE) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g14570	No alias	DNA primase and helicase *(TWINKLE) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g17378	No alias	DNA primase and helicase *(TWINKLE) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008778001	No alias	Cell cycle.organelle machineries.DNA replication.DNA...	0.03	OrthoFinder output from all 47 species
LOC_Os06g45980.1	LOC_Os06g45980	DNA primase and helicase (TWINKLE)	0.02	OrthoFinder output from all 47 species
Ppi_g40063	No alias	DNA primase and helicase *(TWINKLE) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013523	No alias	DNA primase and helicase *(TWINKLE) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e030349_P002	Zm00001e030349	DNA primase and helicase (TWINKLE)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003678	DNA helicase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007694	DNA_helicase_DnaB-like_C	324	565
IPR006171	TOPRIM_domain	168	260

External Links

No external refs found!

Aspi01Gene69210.t1 (Aspi01Gene69210)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation