Solyc02g082920.3.1 (Solyc02g082920.3)


Aliases : Solyc02g082920.3

Description : 20.1 stress.biotic encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. basic chitinase (HCHIB)


Gene families : OG_01_0001170 (Gene family) Phylogenetic Tree(s): OG0001170_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g082920.3.1
Cluster HCCA cluster: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT3G12500 HCHIB, B-CHI,... basic chitinase 0.03 Gene family
GSVIVT01007190001 No alias 20.1 stress.biotic encodes a basic chitinase involved in... 0.08 Gene family
LOC_Os03g04060 Os03g0132900 20.1 stress.biotic encodes a basic chitinase involved in... 0.04 Gene family
LOC_Os05g33130 Os05g0399300 20.1 stress.biotic encodes a basic chitinase involved in... 0.04 Gene family
LOC_Os06g51060 Os06g0726200 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family
LOC_Os10g39680 Os10g0542900 20.1 stress.biotic encodes a basic chitinase involved in... 0.02 Gene family
MA_10313114g0010 No alias 20.1 stress.biotic encodes a basic chitinase involved in... 0.05 Gene family
Solyc02g061770.3.1 Solyc02g061770.3 20.1 stress.biotic encodes a basic chitinase involved in... 0.03 Gene family
Solyc10g055780.1.1 Solyc10g055780.1 20.1 stress.biotic encodes a basic chitinase involved in... 0.03 Gene family
Zm00001d027524 GRMZM2G099454 20.1 stress.biotic encodes a basic chitinase involved in... 0.04 Gene family
Zm00001d029794 GRMZM2G103668 20.1 stress.biotic encodes a basic chitinase involved in... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan
BP GO:0006032 chitin catabolic process IEA InterProScan
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 30 244
No external refs found!