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  5. Aspi01Gene68766.t1

Aspi01Gene68766.t1 (Aspi01Gene68766)


Aliases : Aspi01Gene68766

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene68766.t1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT5G59200 OTP80 Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
Als_g12718 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0068.g036252 No alias not classified & original description: CDS=1-1656 0.02 OrthoFinder output from all 47 species
Cba_g75092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G070800.1 Ceric.29G070800 not classified & original description: pacid=50625555... 0.01 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os03g41530.1 LOC_Os03g41530 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g64370.1 LOC_Os03g64370 Pentatricopeptide repeat-containing protein At5g52850,... 0.02 OrthoFinder output from all 47 species
Len_g04791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_23144g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.01 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g06933 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g20228 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g05174 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo328 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Smo91775 No alias Pentatricopeptide repeat-containing protein At4g25270,... 0.01 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 33 56
IPR002885 Pentatricopeptide_repeat 98 126
IPR002885 Pentatricopeptide_repeat 127 157
IPR002885 Pentatricopeptide_repeat 163 189
IPR002885 Pentatricopeptide_repeat 200 224
No external refs found!