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  5. Aspi01Gene68579.t1

Aspi01Gene68579.t1 (AGO1, Aspi01Gene68579)


Aliases : AGO1, Aspi01Gene68579

Description : siRNA-binding factor *(AGO2) of non-canonical RdDM pathway & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene68579.t1

Target Alias Description ECC score Gene Family Method Actions
Adi_g003675 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013023 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Adi_g049547 AGO1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g061052 AGO1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g086261 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110306 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.05 OrthoFinder output from all 47 species
Adi_g113326 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Ala_g35634 AGO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015464001 PNH, AGO10, ZLL Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
LOC_Os03g33650.1 AGO7, ZIP, LOC_Os03g33650 Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_10429131g0010 AGO1 Protein argonaute 1B OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Msp_g48817 PNH, AGO10, ZLL not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo232189 AGO1 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Spa_g30174 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54963 AGO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029696_P001 AGO1, Zm00001e029696 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Zm00001e037347_P002 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003100 PAZ_dom 280 382
IPR003165 Piwi 512 810
IPR032474 Argonaute_N 63 194
IPR014811 ArgoL1 204 252
IPR032472 ArgoL2 392 439
No external refs found!