0.48

Solyc02g082420.3.1 (Solyc02g082420.3)


Aliases : Solyc02g082420.3

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g082420.3.1
Cluster HCCA cluster: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AT1G74410 No alias RING/U-box superfamily protein 0.04 Gene family
AT3G03550 No alias RING/U-box superfamily protein 0.03 Gene family
AT3G05200 ATL6 RING/U-box superfamily protein 0.03 Gene family
AT3G10910 No alias RING/U-box superfamily protein 0.03 Gene family
Cre01.g051700 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
GSVIVT01000015001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os03g28080 Os03g0398600 No description available 0.02 Gene family
LOC_Os06g34610 Os06g0537100 No description available 0.02 Gene family
MA_10436208g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
MA_201864g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_38494g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_932090g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.08 Gene family
MA_9591879g0010 No alias No description available 0.06 Gene family
Solyc04g074820.2.1 Solyc04g074820.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc07g006400.2.1 Solyc07g006400.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
Zm00001d002491 GRMZM2G090279 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d003497 GRMZM2G171277 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d018823 GRMZM2G029623 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
Zm00001d037023 GRMZM2G447566 No description available 0.02 Gene family
Zm00001d038420 GRMZM2G075782 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.08 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 104 147
No external refs found!