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  5. Aspi01Gene68511.t1

Aspi01Gene68511.t1 (AGO1, Aspi01Gene68511)


Aliases : AGO1, Aspi01Gene68511

Description : miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene68511.t1

Target Alias Description ECC score Gene Family Method Actions
Adi_g013023 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Adi_g017777 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049547 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089102 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Ala_g34221 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g58865 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Aob_g04459 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42950 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28524 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Len_g08893 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
MA_161177g0010 AGO7, ZIP Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Ore_g20845 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo98227 AGO1 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Spa_g27914 AGO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007233_P001 AGO1, Zm00001e007233 RIS-Complex miRNA recruiting factor (AGO1) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003165 Piwi 785 1105
IPR003100 PAZ_dom 502 626
IPR014811 ArgoL1 445 495
IPR032473 Argonaute_Mid_dom 693 769
IPR032472 ArgoL2 636 682
IPR032474 Argonaute_N 301 435
No external refs found!