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  5. Aspi01Gene68508.t1

Aspi01Gene68508.t1 (RGA2, GAI, Aspi01Gene68508)


Aliases : RGA2, GAI, Aspi01Gene68508

Description : transcription factor *(DELLA) & original description: none


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene68508.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00270570 RGL2,... External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
Adi_g082189 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species
Aev_g02589 RGA, RGA1 transcription factor *(DELLA) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26688 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22059 SCR, SGR1 GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g34743 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007532001 RGA2, GAI RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
LOC_Os03g49990.1 RGA2, GAI, LOC_Os03g49990 DELLA-type gibberellin signal transducer. transcription... 0.04 OrthoFinder output from all 47 species
LOC_Os11g31100.1 RGL1, RGL, LOC_Os11g31100 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species
MA_10430831g0010 RGA2, GAI DELLA-type gibberellin signal transducer. transcription... 0.03 OrthoFinder output from all 47 species
MA_1417572g0010 RGA, RGA1 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Ore_g26688 RGA, RGA1 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29234 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g32765 RGA, RGA1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44392 RGA2, GAI transcription factor *(DELLA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017422 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-1875 0.04 OrthoFinder output from all 47 species
Smo139506 RGA2, GAI RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Spa_g20961 RGA, RGA1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005202 TF_GRAS 408 776
IPR021914 TF_DELLA_N 40 104
No external refs found!