1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene68439.t1

Aspi01Gene68439.t1 (PDR11, ATPDR11,...)


Aliases : PDR11, ATPDR11, Aspi01Gene68439

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene68439.t1

Target Alias Description ECC score Gene Family Method Actions
AT2G29940 ATPDR3, PDR3 pleiotropic drug resistance 3 0.03 OrthoFinder output from all 47 species
Adi_g014210 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48617 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g31181 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70240 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011362 PDR6, ATPDR6 subfamily ABCG transporter & original description: CDS=327-4706 0.03 OrthoFinder output from all 47 species
Azfi_s0232.g059286 PEN3, ABCG36,... subfamily ABCG transporter & original description: CDS=735-5249 0.03 OrthoFinder output from all 47 species
Ceric.12G068500.1 ABCG40, PDR12,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z322800.1 PDR6, ATPDR6,... subfamily ABCG transporter & original description:... 0.04 OrthoFinder output from all 47 species
Mp2g07030.1 PDR6, ATPDR6 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Mp2g21340.1 ATPDR3, PDR3 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Mp4g05490.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g03220 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10465 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40984 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016875 ATPDR3, PDR3 subfamily ABCG transporter & original description: CDS=1-2793 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 169 351
IPR043926 ABCG_dom 384 478
IPR043926 ABCG_dom 1083 1145
IPR029481 ABC_trans_N 93 144
IPR013581 PDR_assoc 722 788
IPR003439 ABC_transporter-like_ATP-bd 902 1054
IPR013525 ABC_2_trans 505 717
IPR013525 ABC_2_trans 1199 1411
No external refs found!