Aliases : AGL6, Aspi01Gene68020
Description : MADS/AGL-type transcription factor & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00267050 | AGL6,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00010p00264750 | AGL30,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00021p00254030 | SHP2, AGL5,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00071p00193200 | STK, AGL11,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
AT1G69120 | AGL7, AP1 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G42830 | SHP2, AGL5 | K-box region and MADS-box transcription factor family protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G20240 | PI | K-box region and MADS-box transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g026151 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g50829 | GL19, AGL19 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g51470 | AGL10, CAL1, CAL | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g33966 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene17826.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0003.g007710 | AGL6 | MADS/AGL-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0116.g046386 | AGL65 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g16031 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.12G052200.1 | GL19, AGL19,... | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g51026 | AGL42 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01006592001 | AGL61, DIA | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01008140001 | AGL8, FUL | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01008560001 | SOC1, AGL20, ATSOC1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033253001 | AGL15 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
Gb_03068 | AGL16 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Gb_16301 | STK, AGL11 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Gb_19897 | AGL16 | MADS-box transcription factor 27 OS=Oryza sativa subsp.... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g10504.1 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g45770.1 | AGL6, LOC_Os02g45770 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g22760.1 | AGL61, DIA,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g23950.1 | LOC_Os06g23950 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g23980.1 | AGL16, LOC_Os06g23980 | MADS-box transcription factor 27 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os09g32948.1 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
MA_2986g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_333471g0010 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.06 | OrthoFinder output from all 47 species | |
MA_347547g0010 | SOC1, AGL20, ATSOC1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_6279308g0010 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g18297 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g21886 | AGL30 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0033.g011014 | AGL9, SEP3 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Smo79393 | AGL104 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g106710.1.1 | AGL62, Solyc01g106710 | component MED19 of head module of MEDIATOR transcription... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g065730.2.1 | AGL8, FUL, Solyc02g065730 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g089210.4.1 | AGL7, AP1, Solyc02g089210 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g005320.3.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e011470_P001 | AGL62, Zm00001e011470 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030839_P001 | AGL66, Zm00001e030839 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 33 | 80 |
No external refs found! |