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  5. Aspi01Gene67987.t1

Aspi01Gene67987.t1 (ZFWD1, Aspi01Gene67987)


Aliases : ZFWD1, Aspi01Gene67987

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0001347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene67987.t1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT5G51980 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g22929 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene00609.t1 ZFWD1, Aspi01Gene00609 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene68004.t1 ZFWD1, Aspi01Gene68004 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene69784.t1 ZFWD1, Aspi01Gene69784 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene72519.t1 Aspi01Gene72519 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Cba_g72088 No alias regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Cba_g75051 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g12883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01034394001 ZFWD1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01034409001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
LOC_Os04g48375.1 ZFWD1, LOC_Os04g48375 Zinc finger CCCH domain-containing protein 17 OS=Oryza... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 275 311
IPR001680 WD40_repeat 239 271
IPR001680 WD40_repeat 757 793
IPR001680 WD40_repeat 721 753
IPR001680 WD40_repeat 585 622
IPR001680 WD40_repeat 103 140
No external refs found!