Aspi01Gene67141.t1 (PRT6, Aspi01Gene67141)


Aliases : PRT6, Aspi01Gene67141

Description : type-I-residues E3 ubiquitin ligase *(PRT6) & original description: none


Gene families : OG0003565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003565_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene67141.t1

Target Alias Description ECC score Gene Family Method Actions
Aob_g27314 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63013.t1 PRT6, Aspi01Gene63013 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene67139.t1 PRT6, Aspi01Gene67139 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.06 OrthoFinder output from all 47 species
Ceric.32G041800.1 PRT6, Ceric.32G041800 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g37411 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g10040 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01034169001 PRT6 Protein degradation.N-end rule pathway of targeted... 0.05 OrthoFinder output from all 47 species
Gb_11947 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.04 OrthoFinder output from all 47 species
LOC_Os01g05500.2 PRT6, LOC_Os01g05500 type-I-residues E3 ubiquitin ligase (PRT6) 0.03 OrthoFinder output from all 47 species
Len_g57965 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
MA_10429079g0010 PRT6 E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10429118g0010 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.03 OrthoFinder output from all 47 species
MA_387g0010 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.02 OrthoFinder output from all 47 species
Mp7g16320.1 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.03 OrthoFinder output from all 47 species
Ppi_g14829 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Spa_g18736 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016914_P004 PRT6, Zm00001e016914 type-I-residues E3 ubiquitin ligase (PRT6) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003126 Znf_UBR 113 179
No external refs found!