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  5. Aspi01Gene66676.t2

Aspi01Gene66676.t2 (Aspi01Gene66676)


Aliases : Aspi01Gene66676

Description : regulatory protein (CIB) of blue light perception & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene66676.t2

Target Alias Description ECC score Gene Family Method Actions
AT2G20180 PIL5, PIF1 phytochrome interacting factor 3-like 5 0.05 OrthoFinder output from all 47 species
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.02 OrthoFinder output from all 47 species
AT3G23690 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.02 OrthoFinder output from all 47 species
AT4G34530 CIB1 cryptochrome-interacting basic-helix-loop-helix 1 0.03 OrthoFinder output from all 47 species
AT4G36540 BEE2 BR enhanced expression 2 0.04 OrthoFinder output from all 47 species
Ala_g07904 CIB1 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ala_g08014 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21524 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03428 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05211 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14421 CIB1 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Aop_g21701 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g21794 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Cba_g15079 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Cba_g19851 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G032200.1 Ceric.11G032200 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ceric.17G001900.1 CIB1, Ceric.17G001900 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Cre14.g620850 BIM2 RNA biosynthesis.transcriptional activation.bHLH... 0.01 OrthoFinder output from all 47 species
Dcu_g23589 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010126001 No alias External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
GSVIVT01023783001 CIB1 External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58830.1 LOC_Os03g58830 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os08g01700.1 HEC3, LOC_Os08g01700 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os12g41650.2 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.02 OrthoFinder output from all 47 species
Len_g13668 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g49441 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g17350.1 SPT transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mp6g18480.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Mp6g21470.1 RSL2 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mpzg01410.1 LRL3 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Nbi_g01184 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18447 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38938 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011925 HEC2 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0082.g018070 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Sam_g36377 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48191 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo405220 HEC1 RNA biosynthesis.transcriptional activation.bHLH... 0.01 OrthoFinder output from all 47 species
Smo425336 LRL1 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Zm00001e003624_P003 Zm00001e003624 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
Zm00001e005046_P003 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species
Zm00001e011410_P001 Zm00001e011410 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e015584_P004 CIB1, Zm00001e015584 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
Zm00001e020012_P001 Zm00001e020012 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e035219_P001 Zm00001e035219 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 467 514
No external refs found!