Solyc02g079950.3.1 (Solyc02g079950.3)

Aliases : Solyc02g079950.3

Description : PS.lightreaction.photosystem II.PSII polypeptide subunits Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II. photosystem II subunit Q-2 (PSBQ-2)

Gene families : OG_01_0006213 (Gene family) Phylogenetic Tree(s): OG0006213_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g079950.3.1
Cluster HCCA cluster: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT4G05180 PSBQ-2, PSII-Q, PSBQ photosystem II subunit Q-2 0.21 Gene family
AT4G21280 PSBQA, PSBQ-1, PSBQ photosystem II subunit QA 0.2 Gene family
Cre08.g372450 No alias No description available 0.08 Gene family
GSVIVT01002809001 No alias PS.lightreaction.photosystem II.PSII polypeptide... 0.19 Gene family
LOC_Os07g36080 Os07g0544800 PS.lightreaction.photosystem II.PSII polypeptide... 0.17 Gene family
MA_218996g0010 No alias PS.lightreaction.photosystem II.PSII polypeptide... 0.09 Gene family
Smo106248 PACid_15416318 No description available 0.07 Gene family
Zm00001d006540 GRMZM5G804323 PS.lightreaction.photosystem II.PSII polypeptide... 0.26 Gene family
Zm00001d021703 GRMZM2G021617,... PS.lightreaction.photosystem II.PSII polypeptide... 0.24 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan
CC GO:0009523 photosystem II IEA InterProScan
CC GO:0009654 photosystem II oxygen evolving complex IEA InterProScan
BP GO:0015979 photosynthesis IEA InterProScan
CC GO:0019898 extrinsic component of membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008797 PSII_PsbQ 36 230
No external refs found!