Solyc02g079830.1.1 (Solyc02g079830.1)


Aliases : Solyc02g079830.1

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000772 (Gene family) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g079830.1.1
Cluster HCCA cluster: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT1G55890 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT1G80150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT2G18520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT4G36680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
LOC_Os02g42210 Os02g0633200 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d012606 GRMZM2G139141 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d017317 GRMZM2G165290 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 168 215
IPR002885 Pentatricopeptide_repeat 273 320
IPR002885 Pentatricopeptide_repeat 242 270
IPR002885 Pentatricopeptide_repeat 105 129
IPR002885 Pentatricopeptide_repeat 135 162
No external refs found!