Aspi01Gene65975.t1 (PUB8, B80, Aspi01Gene65975)

Aliases : PUB8, B80, Aspi01Gene65975

Description : E3 ubiquitin ligase *(PUB8) & original description: none

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene65975.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00030110	PUB15,...	U-box domain-containing protein 15 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00007p00217990	evm_27.TU.AmTr_v1...	U-box domain-containing protein 16 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
AMTR_s00072p00171260	PUB14, ATPUB14,...	Protein degradation.peptide tagging.Ubiquitin...	0.04	OrthoFinder output from all 47 species
AMTR_s00086p00031680	evm_27.TU.AmTr_v1...	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT1G29340	ATPUB17, PUB17	plant U-box 17	0.03	OrthoFinder output from all 47 species
Adi_g009234	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g017517	ATPUB17, PUB17	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g026489	No alias	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g083407	PUB13, ATPUB13	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g102535	ATPUB17, PUB17	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aev_g04770	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.07	OrthoFinder output from all 47 species
Aev_g05159	PUB12, AtPUB12	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g09883	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ala_g07408	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g08869	PUB15	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Als_g03799	ATPUB17, PUB17	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g07222	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.07	OrthoFinder output from all 47 species
Als_g16049	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.07	OrthoFinder output from all 47 species
Als_g16594	PUB14, ATPUB14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g01685	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g17483	PUB15	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g19238	ATPUB17, PUB17	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g10750	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g19192	ATPUB17, PUB17	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g60695	ATPUB17, PUB17	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene44182.t1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0001.g000295	No alias	not classified & original description: CDS=1-2304	0.04	OrthoFinder output from all 47 species
Azfi_s2299.g110335	PUB14, ATPUB14	not classified & original description: CDS=293-1597	0.04	OrthoFinder output from all 47 species
Ceric.08G025000.1	Ceric.08G025000	not classified & original description: pacid=50638405...	0.04	OrthoFinder output from all 47 species
Ceric.10G010300.1	ATPUB17, PUB17,...	not classified & original description: pacid=50611933...	0.06	OrthoFinder output from all 47 species
Ceric.13G074400.1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.34G042900.1	PUB13, ATPUB13,...	not classified & original description: pacid=50623547...	0.03	OrthoFinder output from all 47 species
Dac_g02154	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g08066	ATPUB17, PUB17	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g32706	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g35977	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g36575	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g39000	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g39767	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g02654	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g02800	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g06164	ATPUB17, PUB17	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g11164	PUB12, AtPUB12	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g22153	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g29208	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01007275001	PUB9, ATPUB9	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
GSVIVT01009347001	No alias	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01016225001	PUB14, ATPUB14	U-box domain-containing protein 14 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01020229001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.07	OrthoFinder output from all 47 species
GSVIVT01021265001	ATPUB17, PUB17	U-box domain-containing protein 17 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01030205001	No alias	U-box domain-containing protein 16 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01036669001	No alias	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_10627	PUB8, B80	U-box domain-containing protein 13 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Gb_10871	ATPUB17, PUB17	E3 ubiquitin ligase (PUB)	0.04	OrthoFinder output from all 47 species
Gb_20805	ATPUB17, PUB17	E3 ubiquitin ligase (PUB)	0.05	OrthoFinder output from all 47 species
Gb_24091	PUB9, ATPUB9	U-box domain-containing protein 14 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Gb_29276	ATPUB17, PUB17	E3 ubiquitin ligase (PUB)	0.04	OrthoFinder output from all 47 species
LOC_Os01g72600.1	LOC_Os01g72600	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os05g39930.1	LOC_Os05g39930	U-box domain-containing protein 16 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os06g01304.1	PUB14, ATPUB14,...	E3 ubiquitin ligase (PUB)	0.04	OrthoFinder output from all 47 species
Len_g08149	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g04790	PUB14, ATPUB14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_84321g0010	PUB13, ATPUB13	E3 ubiquitin ligase (PUB)	0.04	OrthoFinder output from all 47 species
MA_9917294g0010	ATPUB17, PUB17	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Msp_g01206	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.07	OrthoFinder output from all 47 species
Msp_g31758	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g07136	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g05165	ATPUB17, PUB17	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g20708	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g38766	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g17953	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g01237	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g06418	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003607	ATPUB17, PUB17	not classified & original description: CDS=1-2595	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005097	No alias	not classified & original description: CDS=1-2154	0.04	OrthoFinder output from all 47 species
Smo181353	PUB13, ATPUB13	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
Smo415326	ATPUB17, PUB17	U-box domain-containing protein 1 OS=Medicago truncatula	0.03	OrthoFinder output from all 47 species
Solyc02g072080.1.1	ATPUB17, PUB17,...	U-box domain-containing protein 17 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Solyc03g114160.1.1	Solyc03g114160	E3 ubiquitin ligase (PUB)	0.06	OrthoFinder output from all 47 species
Solyc05g005670.1.1	Solyc05g005670	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Solyc05g008230.3.1	Solyc05g008230	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Solyc06g076040.3.1	PUB13, ATPUB13,...	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Solyc09g056450.4.1	PUB9, ATPUB9,...	U-box domain-containing protein 9 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc11g008390.2.1	PUB14, ATPUB14,...	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Solyc12g088360.2.1	Solyc12g088360	U-box domain-containing protein 4 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Spa_g05552	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.07	OrthoFinder output from all 47 species
Spa_g08558	ATPUB17, PUB17	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Spa_g11468	PUB14, ATPUB14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g25117	PUB14, ATPUB14	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g48656	PUB14, ATPUB14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g48731	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g02458	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Tin_g10003	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Zm00001e003398_P001	PUB15, Zm00001e003398	U-box domain-containing protein 15 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e014566_P002	PUB9, ATPUB9,...	E3 ubiquitin ligase (PUB)	0.04	OrthoFinder output from all 47 species
Zm00001e018578_P001	Zm00001e018578	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e019429_P001	Zm00001e019429	U-box domain-containing protein 16 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Zm00001e028839_P001	Zm00001e028839	U-box domain-containing protein 16 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e031915_P001	Zm00001e031915	U-box domain-containing protein 16 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e034012_P001	Zm00001e034012	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	304	342
IPR003613	Ubox_domain	6	75

External Links

No external refs found!

Aspi01Gene65975.t1 (PUB8, B80, Aspi01Gene65975)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation