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  5. Aspi01Gene65745.t1

Aspi01Gene65745.t1 (SHI, Aspi01Gene65745)


Aliases : SHI, Aspi01Gene65745

Description : SRS-type transcription factor & original description: none


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene65745.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00223800 SHI,... RNA biosynthesis.transcriptional activation.SRS... 0.02 OrthoFinder output from all 47 species
AMTR_s00063p00161200 LRP1,... RNA biosynthesis.transcriptional activation.SRS... 0.06 OrthoFinder output from all 47 species
AT5G12330 LRP1 Lateral root primordium (LRP) protein-related 0.03 OrthoFinder output from all 47 species
Adi_g045239 SRS7 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058361 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058362 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061023 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24739 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0062.g035174 SHI SRS-type transcription factor & original description: CDS=1-1092 0.04 OrthoFinder output from all 47 species
Dde_g47477 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21838 SRS1, STY1 SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009812001 SRS5 RNA biosynthesis.transcriptional activation.SRS... 0.03 OrthoFinder output from all 47 species
GSVIVT01024206001 SHI RNA biosynthesis.transcriptional activation.SRS... 0.05 OrthoFinder output from all 47 species
LOC_Os05g32070.1 LRP1, LOC_Os05g32070 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
LOC_Os06g49830.1 SRS1, STY1,... transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
MA_2299g0010 LRP1 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Ppi_g59296 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007215 SHI SRS-type transcription factor & original description: CDS=1-2160 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013968 SHI SRS-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023316 SRS1, STY1 not classified & original description: CDS=12-590 0.04 OrthoFinder output from all 47 species
Solyc02g084680.3.1 SRS1, STY1,... transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e004006_P001 SHI, Zm00001e004006 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e013256_P002 SHI, Zm00001e013256 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e026854_P001 SHI, Zm00001e026854 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Zm00001e028304_P001 LRP1, Zm00001e028304 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e030189_P001 SHI, Zm00001e030189 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e031567_P001 LRP1, Zm00001e031567 transcription factor (SRS) 0.05 OrthoFinder output from all 47 species
Zm00001e034798_P001 SRS1, STY1,... transcription factor (SRS) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!