Aspi01Gene65743.t1 (CAF2, ATCAF2, Aspi01Gene65743)

Aliases : CAF2, ATCAF2, Aspi01Gene65743

Description : not classified & original description: none

Gene families : OG0001061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001061_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene65743.t1

Target	Alias	Description	ECC score	Gene Family Method
Aop_g13815	CAF2, ATCAF2	component *(CAF) of CRS2-CAF plastidial RNA splicing...	0.03	OrthoFinder output from all 47 species
Aspi01Gene01568.t1	CAF2, ATCAF2,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0435.g069919	CAF2, ATCAF2	component *(CAF) of CRS2-CAF plastidial RNA splicing...	0.03	OrthoFinder output from all 47 species
Cba_g06914	CAF2, ATCAF2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.13G007400.1	CAF2, ATCAF2,...	not classified & original description: pacid=50635785...	0.03	OrthoFinder output from all 47 species
Ceric.14G027700.1	Ceric.14G027700	not classified & original description: pacid=50634377...	0.04	OrthoFinder output from all 47 species
Lfl_g16965	CAF2, ATCAF2	component *(CAF) of CRS2-CAF plastidial RNA splicing...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s1065.g027930	ATCAF1, CAF1	not classified & original description: CDS=49-1527	0.02	OrthoFinder output from all 47 species
Sam_g51074	No alias	component *(CAF) of CRS2-CAF plastidial RNA splicing...	0.02	OrthoFinder output from all 47 species
Smo62891	CAF2, ATCAF2	RNA processing.organelle machineries.RNA...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001890	RNA-binding_CRM	93	172

External Links

No external refs found!