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  5. Aspi01Gene65051.t1

Aspi01Gene65051.t1 (AT-TCP20, TCP20,...)


Aliases : AT-TCP20, TCP20, PCF1, ATTCP20, Aspi01Gene65051

Description : circadian clock activation factor *(TCP20) & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene65051.t1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT3G45150 TCP16 TCP domain protein 16 0.04 OrthoFinder output from all 47 species
AT5G08330 No alias TCP family transcription factor 0.02 OrthoFinder output from all 47 species
Adi_g087907 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03271 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0049.g030896 No alias TCP-type transcription factor & original description: CDS=1-1743 0.03 OrthoFinder output from all 47 species
Ehy_g09171 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019876001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.01 OrthoFinder output from all 47 species
GSVIVT01020011001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
LOC_Os02g42380.1 LOC_Os02g42380 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os02g51280.1 LOC_Os02g51280 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os11g07460.1 LOC_Os11g07460 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Nbi_g02330 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03168 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07074 No alias TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo441321 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
Solyc03g006800.1.1 Solyc03g006800 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc05g007420.2.1 Solyc05g007420 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc08g080150.1.1 Solyc08g080150 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e015209_P001 Zm00001e015209 transcription factor (TCP). CHE circadian clock repression factor 0.02 OrthoFinder output from all 47 species
Zm00001e030854_P001 Zm00001e030854 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 108 234
No external refs found!