Solyc02g078790.3.1 (Solyc02g078790.3)

Aliases : Solyc02g078790.3

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Zinc finger, RING-typeTranscription factor jumonji/aspartyl beta-hydroxylase

Gene families : OG_01_0000378 (Gene family) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Solyc02g078790.3.1
Cluster	HCCA cluster: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
AT1G62310	No alias	transcription factor jumonji (jmjC) domain-containing protein	0.02	Gene family
AT4G00990	No alias	Transcription factor jumonji (jmjC) domain-containing protein	0.02	Gene family
Cre10.g446850	No alias	No description available	0.04	Gene family
GSVIVT01031114001	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Zinc...	0.05	Gene family
GSVIVT01031115001	No alias	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Zinc...	0.04	Gene family
GSVIVT01038553001	No alias	No description available	0.03	Gene family
LOC_Os03g31594	Os03g0430100,...	No description available	0.04	Gene family
MA_103030g0010	No alias	No description available	0.05	Gene family
MA_115863g0010	No alias	No description available	0.03	Gene family
MA_136209g0010	No alias	No description available	0.02	Gene family
Solyc04g049140.3.1	Solyc04g049140.3	No description available	0.02	Gene family
Zm00001d047491	GRMZM2G134415,...	29.5.11.4.2 protein.degradation.ubiquitin.E3.RING Zinc...	0.07	Gene family
Zm00001d054070	GRMZM2G054162	No description available	0.08	Gene family

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018866	Znf-4CXXC_R1	189	257
IPR014977	WRC_dom	53	93
IPR003347	JmjC_dom	728	822

External Links

No external refs found!