Solyc02g078550.3.1 (Solyc02g078550.3)


Aliases : Solyc02g078550.3

Description : 27.4 RNA.RNA binding encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl. C-terminal domain phosphatase-like 1 (CPL1)


Gene families : OG_01_0002059 (Gene family) Phylogenetic Tree(s): OG0002059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g078550.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT4G21670 ATCPL1, CPL1, FRY2 C-terminal domain phosphatase-like 1 0.03 Gene family
AT5G01270 CPL2, ATCPL2 carboxyl-terminal domain (ctd) phosphatase-like 2 0.02 Gene family
GSVIVT01006448001 No alias 27.4 RNA.RNA binding encodes a a novel transcriptional... 0.05 Gene family
Smo173599 PACid_15415726 27.4 RNA.RNA binding encodes a a novel transcriptional... 0.03 Gene family
Zm00001d051242 GRMZM2G120373 27.4 RNA.RNA binding encodes a a novel transcriptional... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004274 FCP1_dom 249 357
IPR014720 dsRBD_dom 836 897
No external refs found!