Solyc02g078010.3.1 (Solyc02g078010.3)


Aliases : Solyc02g078010.3

Description : 29.2.1.1.1.1.5 protein.synthesis.ribosomal protein.prokaryotic.chloroplast.30S subunit.S5 Ribosomal protein S5 family protein


Gene families : OG_01_0006027 (Gene family) Phylogenetic Tree(s): OG0006027_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g078010.3.1
Cluster HCCA cluster: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT2G33800 No alias Ribosomal protein S5 family protein 0.2 Gene family
Cre16.g659950 No alias 29.2.1.1.1.1.5 protein.synthesis.ribosomal... 0.1 Gene family
GSVIVT01021083001 No alias 29.2.1.1.1.1.5 protein.synthesis.ribosomal... 0.19 Gene family
LOC_Os03g34040 Os03g0452300 29.2.1.1.1.1.5 protein.synthesis.ribosomal... 0.07 Gene family
MA_10435489g0010 No alias 29.2.1.1.1.1.5 protein.synthesis.ribosomal... 0.06 Gene family
Smo85905 PACid_15401350 No description available 0.02 Gene family
Zm00001d032420 GRMZM2G025855 29.2.1.1.1.1.5 protein.synthesis.ribosomal... 0.17 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 748 812
IPR005324 Ribosomal_S5_C 825 895
IPR001680 WD40_repeat 419 455
IPR001680 WD40_repeat 534 563
No external refs found!