Solyc02g077960.2.1 (Solyc02g077960.2)

Aliases : Solyc02g077960.2

Description : 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family Encodes a Dof-type transcription factor. TARGET OF MONOPTEROS 6 (TMO6)

Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Solyc02g077960.2.1
Cluster	HCCA cluster: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Gene family
AT2G37590	DOF2.4, ATDOF2.4	DNA binding with one finger 2.4	0.02	Gene family
AT3G45610	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Gene family
AT5G60850	OBP4	OBF binding protein 4	0.03	Gene family
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.03	Gene family
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Gene family
AT5G66940	No alias	Dof-type zinc finger DNA-binding family protein	0.05	Gene family
GSVIVT01019619001	No alias	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
GSVIVT01034189001	No alias	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
LOC_Os01g09720	No alias	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
LOC_Os01g17000	Os01g0277500	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
LOC_Os01g48290	Os01g0673700	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.08	Gene family
LOC_Os03g07360	Os03g0169600	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
LOC_Os03g42200	Os03g0619001,...	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.02	Gene family
LOC_Os03g55610	Os03g0764900	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.02	Gene family
LOC_Os04g58190	Os04g0678400	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.02	Gene family
LOC_Os05g02150	Os05g0112200	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.04	Gene family
LOC_Os05g36900	Os05g0440000	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
LOC_Os07g32510	Os07g0508700,...	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
LOC_Os08g38220	Os08g0490100	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
LOC_Os10g35300	Os10g0496000	No description available	0.02	Gene family
LOC_Os12g39990	Os12g0590700	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
Solyc02g090310.1.1	Solyc02g090310.1	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
Solyc03g121400.1.1	Solyc03g121400.1	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.04	Gene family
Solyc06g062520.1.1	Solyc06g062520.1	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.02	Gene family
Zm00001d013724	GRMZM2G061292	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.05	Gene family
Zm00001d017788	GRMZM2G140694	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
Zm00001d020837	GRMZM2G089850	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.09	Gene family
Zm00001d021591	GRMZM2G134545,...	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.07	Gene family
Zm00001d026628	GRMZM2G142718	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.02	Gene family
Zm00001d030727	GRMZM2G123900	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.05	Gene family
Zm00001d032999	GRMZM2G138455	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.04	Gene family
Zm00001d033093	GRMZM2G011832	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
Zm00001d034163	GRMZM2G108865	16.5.1.2.3 secondary...	0.06	Gene family
Zm00001d038281	GRMZM2G371058	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.05	Gene family
Zm00001d039482	GRMZM2G378490	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
Zm00001d041549	GRMZM2G176063	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.03	Gene family
Zm00001d051577	GRMZM2G589696	27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc...	0.05	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	53	107

External Links

No external refs found!

Solyc02g077960.2.1 (Solyc02g077960.2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation