1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene63898.t1

Aspi01Gene63898.t1 (Aspi01Gene63898)


Aliases : Aspi01Gene63898

Description : not classified & original description: none


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene63898.t1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00236380 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g61360... 0.02 OrthoFinder output from all 47 species
AMTR_s00142p00073110 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g73400,... 0.03 OrthoFinder output from all 47 species
Aev_g30805 MEE40 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14737.t1 EMB2261, Aspi01Gene14737 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene63884.t1 Aspi01Gene63884 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g14940 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014467 No alias not classified & original description: CDS=1-2058 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 217 244
IPR002885 Pentatricopeptide_repeat 324 353
IPR002885 Pentatricopeptide_repeat 535 564
IPR002885 Pentatricopeptide_repeat 252 299
IPR002885 Pentatricopeptide_repeat 356 404
IPR002885 Pentatricopeptide_repeat 147 191
IPR002885 Pentatricopeptide_repeat 425 472
No external refs found!