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  5. Aspi01Gene63897.t1

Aspi01Gene63897.t1 (Aspi01Gene63897)


Aliases : Aspi01Gene63897

Description : not classified & original description: none


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene63897.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00129420 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00047p00228510 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13420,... 0.02 OrthoFinder output from all 47 species
Aspi01Gene14737.t1 EMB2261, Aspi01Gene14737 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59818.t1 Aspi01Gene59818 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000737.24 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g12312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2112.g028265 No alias not classified & original description: CDS=1-1269 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 220 268
IPR002885 Pentatricopeptide_repeat 43 90
IPR002885 Pentatricopeptide_repeat 116 162
IPR002885 Pentatricopeptide_repeat 182 213
IPR002885 Pentatricopeptide_repeat 285 317
IPR002885 Pentatricopeptide_repeat 12 39
No external refs found!