Aspi01Gene63493.t1 (ATU2AF65A, Aspi01Gene63493)

Aliases : ATU2AF65A, Aspi01Gene63493

Description : large subunit of U2AF pre-RNA splicing auxiliary factor complex & original description: none

Gene families : OG0000716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene63493.t1
Cluster	HCCA: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00267190	ATU2AF65A,...	RNA processing.RNA splicing.U2-type-intron-specific...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000383.37	ATU2AF65A	Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia	0.01	OrthoFinder output from all 47 species
Pnu_g25870	ATU2AF65A	large subunit of U2AF pre-RNA splicing auxiliary factor...	0.03	OrthoFinder output from all 47 species
Ppi_g06430	No alias	large subunit of U2AF pre-RNA splicing auxiliary factor...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	481	540
IPR000504	RRM_dom	313	382

External Links

No external refs found!