Aspi01Gene63483.t1 (CRR22, Aspi01Gene63483)

Aliases : CRR22, Aspi01Gene63483

Description : not classified & original description: none

Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene63483.t1
Cluster	HCCA: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method
AT5G43790	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.04	OrthoFinder output from all 47 species
Adi_g034172	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g034179	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g048224	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g052049	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g059864	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g085510	CRR2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g089353	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g095327	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g41951	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g05216	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g17517	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g23203	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g26977	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g26992	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g37552	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g30728	No alias	ssDNA-binding protein *(OSB) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene06807.t1	Aspi01Gene06807	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene14860.t1	Aspi01Gene14860	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene20358.t1	Aspi01Gene20358	ssDNA-binding protein *(OSB) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene33810.t1	Aspi01Gene33810	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene61596.t1	CRR2, Aspi01Gene61596	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s1395.g102559	No alias	not classified & original description: CDS=1-912	0.03	OrthoFinder output from all 47 species
Azfi_s3922.g117339	No alias	not classified & original description: CDS=1-831	0.03	OrthoFinder output from all 47 species
Cba_g23772	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g33742	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g34546	No alias	ssDNA-binding protein *(OSB) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g75371	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.12G032100.1	Ceric.12G032100	not classified & original description: pacid=50600532...	0.03	OrthoFinder output from all 47 species
Ceric.15G050700.1	Ceric.15G050700	not classified & original description: pacid=50639527...	0.03	OrthoFinder output from all 47 species
Ceric.39G023200.1	CRR2, Ceric.39G023200	not classified & original description: pacid=50582462...	0.04	OrthoFinder output from all 47 species
Dac_g43531	OTP84	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g12220	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g38857	No alias	ssDNA-binding protein *(OSB) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g40681	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g05757	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g05943	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g22123	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g22169	EMB2758	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g28699	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g28812	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g38127	MEF19	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g18251	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Len_g26317	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g09843	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g11306	OTP84	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g17452	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g04397	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g23526	REME1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g30445	REME1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33905	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42335	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g43973	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g13009	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g40819	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63825	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g03104	CRR22	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g04988	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06375	No alias	ssDNA-binding protein *(OSB) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g07011	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g09510	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g13334	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g29583	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g29767	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g53393	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g57369	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g59346	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003208	No alias	monogalactosyldiacylglycerol lipase *(HIL1) & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019336	No alias	not classified & original description: CDS=1-1245	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019387	REME1	not classified & original description: CDS=1-1161	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019544	OSB3	ssDNA-binding protein *(OSB) & original description: CDS=30-812	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019756	No alias	not classified & original description: CDS=1-2544	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023182	No alias	not classified & original description: CDS=1-4812	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0345.g027287	No alias	not classified & original description: CDS=1-2001	0.03	OrthoFinder output from all 47 species
Sam_g02448	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g09699	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g36326	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g43933	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g48865	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo5521	No alias	Pentatricopeptide repeat-containing protein At4g30700...	0.02	OrthoFinder output from all 47 species
Tin_g04710	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g05656	DOT4	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g26720	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	800	880
IPR002885	Pentatricopeptide_repeat	571	617
IPR002885	Pentatricopeptide_repeat	369	416
IPR002885	Pentatricopeptide_repeat	470	514
IPR002885	Pentatricopeptide_repeat	267	315
IPR002885	Pentatricopeptide_repeat	645	668
IPR002885	Pentatricopeptide_repeat	343	365
IPR002885	Pentatricopeptide_repeat	444	469

External Links

No external refs found!

Aspi01Gene63483.t1 (CRR22, Aspi01Gene63483)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation