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  5. Aspi01Gene63196.t1

Aspi01Gene63196.t1 (OPCL1, Aspi01Gene63196)


Aliases : OPCL1, Aspi01Gene63196

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene63196.t1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Adi_g015908 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10320 ACOS5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0230.g059166 OPCL1 not classified & original description: CDS=193-1959 0.03 OrthoFinder output from all 47 species
Ceric.36G025100.1 OPCL1, Ceric.36G025100 not classified & original description: pacid=50568001... 0.03 OrthoFinder output from all 47 species
Dac_g22397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_13602 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_19726 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_19734 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g04000.1 OPCL1, LOC_Os03g04000 OPC-8:CoA synthetase 0.02 OrthoFinder output from all 47 species
LOC_Os03g05780.1 LOC_Os03g05780 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os07g17970.1 LOC_Os07g17970 4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Len_g07586 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08577 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430515g0010 OPCL1 OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species
MA_10922g0010 OPCL1 OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species
Mp1g05060.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g42148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo123905 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc12g094520.2.1 OPCL1, Solyc12g094520 OPC-8:CoA synthetase 0.02 OrthoFinder output from all 47 species
Spa_g01541 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02284 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004865_P001 Zm00001e004865 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 46 454
IPR025110 AMP-bd_C 463 538
No external refs found!