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  5. Aspi01Gene63195.t1

Aspi01Gene63195.t1 (OPCL1, Aspi01Gene63195)


Aliases : OPCL1, Aspi01Gene63195

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene63195.t1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cba_g29974 OPCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g62425 OPCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.36G025100.1 OPCL1, Ceric.36G025100 not classified & original description: pacid=50568001... 0.05 OrthoFinder output from all 47 species
Dac_g10656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008694001 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Lfl_g15634 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10360661g0020 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g13004 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c3_24370V3.1 Pp3c3_24370 AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
Solyc03g111170.3.1 Solyc03g111170 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g094520.2.1 OPCL1, Solyc12g094520 OPC-8:CoA synthetase 0.05 OrthoFinder output from all 47 species
Spa_g02284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 46 454
IPR025110 AMP-bd_C 463 538
No external refs found!