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  5. Aspi01Gene63015.t1

Aspi01Gene63015.t1 (PRT6, Aspi01Gene63015)


Aliases : PRT6, Aspi01Gene63015

Description : not classified & original description: none


Gene families : OG0003565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene63015.t1

Target Alias Description ECC score Gene Family Method Actions
AT5G02310 PRT6 proteolysis 6 0.03 OrthoFinder output from all 47 species
Adi_g020061 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.05 OrthoFinder output from all 47 species
Ala_g11391 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Als_g05145 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.04 OrthoFinder output from all 47 species
Ceric.32G041800.1 PRT6, Ceric.32G041800 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Dac_g15533 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01034169001 PRT6 Protein degradation.N-end rule pathway of targeted... 0.04 OrthoFinder output from all 47 species
LOC_Os01g05500.2 PRT6, LOC_Os01g05500 type-I-residues E3 ubiquitin ligase (PRT6) 0.03 OrthoFinder output from all 47 species
MA_10429079g0010 PRT6 E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10429118g0010 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.03 OrthoFinder output from all 47 species
Mp7g16320.1 PRT6 type-I-residues E3 ubiquitin ligase (PRT6) 0.05 OrthoFinder output from all 47 species
Ore_g16132 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.03 OrthoFinder output from all 47 species
Spa_g18736 PRT6 type-I-residues E3 ubiquitin ligase *(PRT6) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016914_P004 PRT6, Zm00001e016914 type-I-residues E3 ubiquitin ligase (PRT6) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR044046 E3_ligase_UBR-like_C 489 891
IPR044046 E3_ligase_UBR-like_C 948 1026
No external refs found!