Aspi01Gene62960.t1 (Aspi01Gene62960)


Aliases : Aspi01Gene62960

Description : microtubule assembly factor *(TCS1) & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene62960.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00204p00028740 evm_27.TU.AmTr_v1... Filament-like plant protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G23360 No alias Plant protein of unknown function (DUF869) 0.03 OrthoFinder output from all 47 species
AT3G19370 No alias Plant protein of unknown function (DUF869) 0.03 OrthoFinder output from all 47 species
Adi_g012789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g065239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g08039 No alias microtubule assembly factor *(TCS1) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g09626 No alias microtubule assembly factor *(TCS1) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g10655 No alias microtubule assembly factor *(TCS1) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17570 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36293 No alias microtubule assembly factor *(TCS1) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0074.g037431 No alias not classified & original description: CDS=151-3552 0.05 OrthoFinder output from all 47 species
Cba_g11615 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G092800.1 Ceric.13G092800 microtubule assembly factor *(TCS1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.39G041500.1 Ceric.39G041500 not classified & original description: pacid=50583040... 0.04 OrthoFinder output from all 47 species
Dac_g04287 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21032 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21457 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_25170 No alias Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g14250.1 LOC_Os03g14250 Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g55570.1 LOC_Os04g55570 Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g06910.1 LOC_Os11g06910 Exocyst complex recruiting factor (VETH) 0.03 OrthoFinder output from all 47 species
Mp1g20920.1 No alias Exocyst complex recruiting factor (VETH) 0.02 OrthoFinder output from all 47 species
Nbi_g02461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08797 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17542 No alias recruiting factor *(VETH) of Exocyst complex & original... 0.04 OrthoFinder output from all 47 species
Ppi_g30136 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009503 No alias not classified & original description: CDS=366-3284 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021755 No alias not classified & original description: CDS=1227-4859 0.04 OrthoFinder output from all 47 species
Sam_g07467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo104884 No alias Filament-like plant protein 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo134290 No alias Filament-like plant protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g41953 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041784_P001 Zm00001e041784 Filament-like plant protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008587 FPP_plant 60 954
IPR041373 RT_RNaseH 1155 1224
No external refs found!