1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene62396.t1

Aspi01Gene62396.t1 (SBP1, Aspi01Gene62396)


Aliases : SBP1, Aspi01Gene62396

Description : not classified & original description: none


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene62396.t1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT1G32740 No alias SBP (S-ribonuclease binding protein) family protein 0.03 OrthoFinder output from all 47 species
AT3G12920 No alias SBP (S-ribonuclease binding protein) family protein 0.05 OrthoFinder output from all 47 species
AT4G17680 No alias SBP (S-ribonuclease binding protein) family protein 0.03 OrthoFinder output from all 47 species
Adi_g039739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08224 SBP1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g12144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36114 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0299.g063636 No alias not classified & original description: CDS=599-2044 0.03 OrthoFinder output from all 47 species
Azfi_s0329.g065317 RING not classified & original description: CDS=1-1395 0.07 OrthoFinder output from all 47 species
Ceric.03G084800.1 Ceric.03G084800 not classified & original description: pacid=50571355... 0.03 OrthoFinder output from all 47 species
Dac_g02764 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g03553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05698 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01026248001 RING E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_15555 No alias Probable BOI-related E3 ubiquitin-protein ligase 2... 0.05 OrthoFinder output from all 47 species
Gb_20681 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.03 OrthoFinder output from all 47 species
LOC_Os02g32420.1 LOC_Os02g32420 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g46570.1 LOC_Os03g46570 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.06 OrthoFinder output from all 47 species
LOC_Os04g32980.1 LOC_Os04g32980 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g33030.1 LOC_Os04g33030 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g34020.1 RING, LOC_Os11g34020 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os11g34080.1 LOC_Os11g34080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g33315 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_20558g0010 No alias BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_24642g0020 ACN1, AAE7 Acetate/butyrate--CoA ligase AAE7, peroxisomal... 0.05 OrthoFinder output from all 47 species
Nbi_g00907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15278 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g06205 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g37913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018517 No alias not classified & original description: CDS=1110-2285 0.04 OrthoFinder output from all 47 species
Solyc08g007120.3.1 Solyc08g007120 Probable BOI-related E3 ubiquitin-protein ligase 2... 0.02 OrthoFinder output from all 47 species
Spa_g50942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012302_P001 Zm00001e012302 Probable BOI-related E3 ubiquitin-protein ligase 3... 0.02 OrthoFinder output from all 47 species
Zm00001e015473_P004 Zm00001e015473 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e024196_P001 RING, Zm00001e024196 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!