Solyc02g071980.3.1 (Solyc02g071980.3)


Aliases : Solyc02g071980.3

Description : 27.3.99 RNA.regulation of transcription.unclassified RING/FYVE/PHD-type zinc finger family protein


Gene families : OG_01_0001514 (Gene family) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g071980.3.1
Cluster HCCA cluster: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AT1G29800 No alias RING/FYVE/PHD-type zinc finger family protein 0.04 Gene family
AT3G43230 No alias RING/FYVE/PHD-type zinc finger family protein 0.05 Gene family
Cre16.g668550 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.02 Gene family
GSVIVT01014153001 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.06 Gene family
GSVIVT01015009001 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.05 Gene family
LOC_Os02g13890 Os02g0233100 27.3.99 RNA.regulation of transcription.unclassified... 0.06 Gene family
LOC_Os06g35910 Os06g0552400 27.3.99 RNA.regulation of transcription.unclassified... 0.04 Gene family
LOC_Os07g17130 Os07g0272400 27.3.99 RNA.regulation of transcription.unclassified... 0.03 Gene family
Zm00001d016234 GRMZM2G328060 27.3.99 RNA.regulation of transcription.unclassified... 0.03 Gene family
Zm00001d019348 GRMZM5G872216 27.3.99 RNA.regulation of transcription.unclassified... 0.03 Gene family
Zm00001d022148 GRMZM2G108767 27.3.99 RNA.regulation of transcription.unclassified... 0.05 Gene family
Zm00001d053541 GRMZM2G128608 27.3.99 RNA.regulation of transcription.unclassified... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000306 Znf_FYVE 378 443
IPR007461 Ysc84_actin-binding 560 684
No external refs found!