Solyc02g071730.3.1 (Solyc02g071730.3)


Aliases : Solyc02g071730.3

Description : 33.99 development.unspecified Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs. AGAMOUS (AG)


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g071730.3.1
Cluster HCCA cluster: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT1G24260 AGL9, SEP3 K-box region and MADS-box transcription factor family protein 0.02 Gene family
AT1G26310 AGL10, CAL1, CAL K-box region and MADS-box transcription factor family protein 0.04 Gene family
AT1G69120 AGL7, AP1 K-box region and MADS-box transcription factor family protein 0.04 Gene family
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.04 Gene family
AT3G02310 AGL4, SEP2 K-box region and MADS-box transcription factor family protein 0.04 Gene family
AT3G57230 AGL16 AGAMOUS-like 16 0.03 Gene family
AT4G22950 GL19, AGL19 AGAMOUS-like 19 0.05 Gene family
AT4G24540 AGL24 AGAMOUS-like 24 0.03 Gene family
AT5G15800 AGL2, SEP1 K-box region and MADS-box transcription factor family protein 0.03 Gene family
AT5G60440 AGL62 AGAMOUS-like 62 0.03 Gene family
AT5G60910 AGL8, FUL AGAMOUS-like 8 0.07 Gene family
GSVIVT01008560001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
GSVIVT01012249001 No alias 33.99 development.unspecified Encodes a MADS box... 0.03 Gene family
GSVIVT01037024001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01037026001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family
LOC_Os02g45770 Os02g0682200 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os03g11614 Os03g0215400 33.99 development.unspecified Encodes a MADS box... 0.02 Gene family
LOC_Os04g23910 Os04g0304400 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os05g11380 No alias 33.99 development.unspecified Floral homeotic gene... 0.03 Gene family
MA_126898g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.06 Gene family
MA_51624g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
MA_6042439g0010 No alias No description available 0.04 Gene family
MA_9841429g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Zm00001d003409 GRMZM2G032905 27.3.24 RNA.regulation of transcription.MADS box... 0.06 Gene family
Zm00001d017932 GRMZM2G044408,... 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002487 TF_Kbox 101 187
IPR002100 TF_MADSbox 26 73
No external refs found!