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  5. Aspi01Gene61342.t1

Aspi01Gene61342.t1 (Aspi01Gene61342)


Aliases : Aspi01Gene61342

Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene61342.t1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AT1G69690 No alias TCP family transcription factor 0.04 OrthoFinder output from all 47 species
AT5G23280 No alias TCP family transcription factor 0.03 OrthoFinder output from all 47 species
Als_g55010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54856.t1 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0049.g030896 No alias TCP-type transcription factor & original description: CDS=1-1743 0.03 OrthoFinder output from all 47 species
Dcu_g19331 No alias TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g69980.1 AT-TCP20, TCP20,... transcription factor (TCP). TCP20 circadian clock... 0.03 OrthoFinder output from all 47 species
LOC_Os02g42380.1 LOC_Os02g42380 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g11830.1 LOC_Os04g11830 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os11g07460.1 LOC_Os11g07460 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Zm00001e003744_P001 Zm00001e003744 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e016271_P001 Zm00001e016271 transcription factor (TCP). CHE circadian clock repression factor 0.02 OrthoFinder output from all 47 species
Zm00001e024509_P001 Zm00001e024509 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 129 243
No external refs found!