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  5. Aspi01Gene61220.t1

Aspi01Gene61220.t1 (AGO1, Aspi01Gene61220)


Aliases : AGO1, Aspi01Gene61220

Description : not classified & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene61220.t1
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00114260 AGO2,... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00171480 AGO7, ZIP,... Protein argonaute 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G31290 AGO3 ARGONAUTE 3 0.02 OrthoFinder output from all 47 species
Adi_g013023 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Adi_g049547 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10073 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Aev_g28185 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14664 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.04 OrthoFinder output from all 47 species
Aob_g11029 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Aob_g22649 AGO7, ZIP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10666 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene28463.t1 AGO1, Aspi01Gene28463 regulatory protein *(AGO7) of transacting siRNA pathway... 0.06 OrthoFinder output from all 47 species
Aspi01Gene29180.t1 AGO1, Aspi01Gene29180 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.06 OrthoFinder output from all 47 species
Aspi01Gene59574.t1 AGO1, Aspi01Gene59574 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.05 OrthoFinder output from all 47 species
Aspi01Gene62001.t1 AGO3, Aspi01Gene62001 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene71412.t1 AGO9, Aspi01Gene71412 siRNA-integrating factor *(AGO) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0460.g072055 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.04 OrthoFinder output from all 47 species
Dac_g02891 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42950 AGO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07100 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.01 OrthoFinder output from all 47 species
GSVIVT01012490001 AGO7, ZIP Protein argonaute 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01037488001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
LOC_Os02g58490.1 AGO1, LOC_Os02g58490 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
LOC_Os07g09020.1 AGO5, LOC_Os07g09020 Protein argonaute 14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g08893 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Lfl_g35792 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
MA_18547g0010 AGO1 Protein argonaute 1A OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Ore_g41760 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18269 AGO6 siRNA-integrating factor *(AGO) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23416 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_350V3.1 AGO1, Pp3c17_350 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 OrthoFinder output from all 47 species
Ppi_g18600 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.04 OrthoFinder output from all 47 species
Ppi_g29895 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25176 No alias siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Smo110151 AGO1 Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
Tin_g39101 AGO1 regulatory protein *(AGO7) of transacTing siRNA pathway... 0.03 OrthoFinder output from all 47 species
Zm00001e004997_P001 PNH, AGO10, ZLL,... Protein argonaute 18 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e007233_P001 AGO1, Zm00001e007233 RIS-Complex miRNA recruiting factor (AGO1) 0.01 OrthoFinder output from all 47 species
Zm00001e011432_P001 AGO5, Zm00001e011432 Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e016179_P001 PNH, AGO10, ZLL,... Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032472 ArgoL2 527 573
IPR003100 PAZ_dom 410 516
IPR032474 Argonaute_N 186 320
IPR003165 Piwi 683 1007
IPR014811 ArgoL1 333 381
No external refs found!