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  5. Aspi01Gene60879.t1

Aspi01Gene60879.t1 (RIN4, Aspi01Gene60879)


Aliases : RIN4, Aspi01Gene60879

Description : not classified & original description: none


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene60879.t1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00117p00057980 RIN4,... External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
Adi_g001556 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Als_g02908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14198 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0111.g045667 RIN4 not classified & original description: CDS=218-763 0.04 OrthoFinder output from all 47 species
Ceric.02G076700.1 RIN4, Ceric.02G076700 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.07 OrthoFinder output from all 47 species
Dac_g10666 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Dde_g18230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g15850 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Len_g17079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03850 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Lfl_g25765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62336 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018170 RIN4 not classified & original description: CDS=1115-1720 0.04 OrthoFinder output from all 47 species
Sam_g01442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07888 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g09623 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Spa_g29992 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 4 38
No external refs found!