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  5. Aspi01Gene59574.t1

Aspi01Gene59574.t1 (AGO1, Aspi01Gene59574)


Aliases : AGO1, Aspi01Gene59574

Description : miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene59574.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00069070 AGO7, ZIP,... Chromatin organisation.DNA methylation.canonical... 0.05 OrthoFinder output from all 47 species
Adi_g013023 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Als_g40616 AGO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g41650 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28463.t2 Aspi01Gene28463 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene61220.t1 AGO1, Aspi01Gene61220 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene62001.t1 AGO3, Aspi01Gene62001 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0460.g072055 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Dac_g39598 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Dac_g42950 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50313 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
GSVIVT01015464001 PNH, AGO10, ZLL Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
LOC_Os07g28850.1 AGO1, LOC_Os07g28850 Protein argonaute 18 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g24514 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032474 Argonaute_N 246 380
IPR032473 Argonaute_Mid_dom 638 714
IPR014811 ArgoL1 390 440
IPR003100 PAZ_dom 446 571
IPR032472 ArgoL2 581 627
IPR003165 Piwi 730 1049
No external refs found!